Fitness data for PP_1782 in Pseudomonas putida KT2440

dTDP-4-dehydrorhamnose 3,5-epimerase
SEED: dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)
KEGG: dTDP-4-dehydrorhamnose 3,5-epimerase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
phage P. putida South MOI 10 -1.1 -2.2 compare
phage P. putida South MOI 10 -1.0 -2.7 compare
phage PUT8 MOI 0.1 -0.9 -2.1 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.7 -2.7 compare
phage P. putida South MOI 0.1 -0.7 -2.6 compare
carbon source carbon source D-Glucose 55.5 mM -0.7 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.7 -3.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.7 -1.6 compare
phage P. put South MOI 1 -0.6 -3.0 compare
phage P. put PUT 10 MOI 10 -0.6 -2.5 compare
phage PUT8 MOI 0.1 -0.6 -2.2 compare
phage PUT 8 MOI 1 -0.6 -1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -2.6 compare
carbon source ferulate (C); with MOPS -0.5 -1.4 compare
stress Growth with Chloride 500 mM +0.6 +2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.6 +1.6 compare
temperature shift Temperature shift 30_to_10; with MOPS +0.6 +2.3 compare
pH Growth at pH6 and (C) Trisodium citrate +0.7 +3.6 compare
phage P. putida Sci Big MOI 0.1 +0.7 +3.0 compare
carbon source D-Glucose (C) +0.7 +3.0 compare