Fitness data for PP_1762 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage P. put South MOI 0.1 -0.6 -3.8 compare
phage P. putida South MOI 10 -0.6 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.6 -3.1 compare
phage P. putida PUT10 MOI 10 -0.6 -3.3 compare
pH Growth at pH7 and (C) D-Glucose -0.6 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.6 -1.9 compare
phage P. put South MOI 0.1 -0.6 -3.3 compare
phage P. put PUT 10 MOI 10 -0.5 -2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -1.7 compare
carbon source carbon source D-Glucose 55.5 mM -0.5 -2.0 compare
phage P. putida PUT10 MOI 10 -0.5 -2.3 compare
carbon source Levulinic Acid (C) +0.4 +2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.4 +2.8 compare
pH Growth at pH7 and (C) Trisodium citrate +0.5 +2.7 compare
temperature shift Temperature shift 30_to_21; with MOPS +0.5 +2.1 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +1.8 compare
pH pH 6 +0.5 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.4 compare
carbon source ferulate (C); with MOPS +0.6 +2.1 compare
pH Valerolactone (C) pH 6.5 +0.6 +2.6 compare