Fitness data for PP_1748 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Deblocking aminopeptidase (EC 3.4.11.-) @ Cyanophycinase 2 (EC 3.4.15.6)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
phage P. putida Missley MOI 0.1 -1.6 -1.8 compare
nitrogen source nitrogen source nitrite 1mM -1.3 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.2 -2.7 compare
phage P. putida Sci Big MOI 0.1 -1.2 -2.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.2 -2.9 compare
pH Growth at pH7 and (C) D-Glucose -1.1 -1.9 compare
carbon source Valerolactone (C) -1.1 -2.7 compare
phage PUT8 MOI 0.1 -1.0 -3.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.0 -2.2 compare
nitrogen source Ammonium chloride (N) -1.0 -2.2 compare
nitrogen source NAG (N); with MOPS -0.9 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -3.4 compare
phage P. put South MOI 10 -0.9 -1.7 compare
stress Growth with Chloride 200 mM -0.9 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.8 -1.7 compare
phage P. putida South MOI 1 -0.8 -2.6 compare
reactor 40hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. -0.8 -2.6 compare
nitrogen source nitrate (N) -0.8 -2.7 compare
nitrogen source Ammonium chloride (N) +0.9 +2.3 compare
nitrogen source 2,6-diaminopimelic (N) +1.0 +1.9 compare