Fitness data for PP_1722 in Pseudomonas putida KT2440

ABC transporter, ATP-binding protein
SEED: Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1)
KEGG: putative spermidine/putrescine transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
pH Growth at pH6 and (C) D-Glucose -0.9 -1.5 compare
carbon source ferulate (C); with MOPS -0.6 -2.0 compare
carbon source D-Glucose (C); with MOPS -0.5 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.5 -1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.5 -1.9 compare
no stress control Growth with no stress -0.5 -2.0 compare
pH Growth at pH6 and (C) D-Glucose -0.5 -1.3 compare
phage P. put South MOI 0.1 -0.5 -1.8 compare
carbon source L-Phenylalanine 5 mM (C) -0.5 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.5 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +2.0 compare
phage P. putida Sci small MOI 0.1 +0.5 +1.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +0.5 +2.5 compare
stress Isobutyl alcohol 0.6 vol% +0.5 +2.6 compare
temperature shift Temperature shift 30_to_34; with MOPS +0.5 +2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.5 +2.5 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +1.9 compare
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM +0.6 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.5 compare
nitrogen source nitrogen source nitrate 5mM +0.7 +2.7 compare