Fitness data for PP_1716 in Pseudomonas putida KT2440

Transcriptional regulator, Cro/CI family
SEED: Transcriptional regulator, Cro/CI family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.6)


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group condition fitness t score  
carbon source butyrate (C) -4.9 -2.5 compare
nitrogen source Ammonium chloride (N) -2.8 -1.7 compare
carbon source 4-Aminobutyric 10 mM (C) -2.7 -1.6 compare
carbon source butyrate (C) -2.7 -2.3 compare
carbon source Valerolactone (C) -2.6 -2.0 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM -2.4 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -2.4 -2.2 compare
carbon source Crotonic (C) -2.4 -3.1 compare
carbon source L-Lysine (C) -2.3 -1.9 compare
pH pH 5 -2.1 -2.5 compare
pH Growth at pH6 and (C) D-Glucose -2.0 -1.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.0 -2.4 compare
carbon source Delta-Nonalactone (C) -1.9 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.9 -1.5 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -1.6 -2.0 compare
carbon source L-Leucine (C) -1.6 -1.6 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -1.6 -2.0 compare
nitrogen source 2,6-diaminopimelic (N) +1.8 +2.5 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.9 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +2.9 +2.7 compare