Fitness data for PP_1707 in Pseudomonas putida KT2440

D-isomer specific 2-hydroxyacid dehydrogenase family protein
SEED: Hydroxypyruvate reductase (EC 1.1.1.81)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.3 -4.4 compare
carbon source Valeric (C) -0.9 -2.3 compare
phage P. putida Missley MOI 0.1 -0.8 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.8 -3.5 compare
carbon source Myristic (C) -0.8 -2.1 compare
temperature shift Temperature shift 30_to_21; with MOPS -0.7 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.6 -2.2 compare
carbon source 1,3-Butandiol (C) -0.5 -2.1 compare
carbon source L-Phenylalanine 5 mM (C) -0.5 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.5 -2.1 compare
stress Growth with Chloride 200 mM; with MOPS -0.5 -1.5 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay +0.5 +2.6 compare
carbon source carbon source Bisabolene 48.9 mM +0.5 +2.3 compare
pH pH 8 +0.6 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.7 compare
pH pH 6 +0.6 +2.1 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.7 +2.0 compare
pH pH 9 +0.7 +2.2 compare
carbon source carbon source 3-O-methyl-glucose 50 mM +0.8 +3.4 compare
carbon source carbon source 4-vinylphenol 0.1 mM +0.8 +2.8 compare