Fitness data for PP_1656 in Pseudomonas putida KT2440

ATP:GTP 3'-pyrophosphotransferase
SEED: GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2)
KEGG: GTP pyrophosphokinase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 4.4)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +4.4 +12.2 compare
carbon source carbon source 3-O-methyl-glucose 50 mM +4.4 +15.9 compare
carbon source carbon source 3-O-methyl-glucose 10 mM +4.4 +15.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +4.5 +15.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +4.5 +11.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +4.5 +18.5 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. +4.5 +23.0 compare
carbon source carbon source 4-vinylphenol 0.1 mM +4.5 +17.8 compare
carbon source Hexanoic (C) +4.5 +8.9 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +4.5 +24.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +4.8 +18.0 compare
stress TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 2 +5.0 +23.4 compare
stress 3-methyl-1-butanol 0.4 vol% +5.2 +20.0 compare
stress Butanol 0.6 vol% +5.2 +19.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +5.9 +24.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +5.9 +22.0 compare
nitrogen source L-Methionine (N) +6.0 +28.0 compare
nitrogen source L-Methionine (N) +6.0 +26.1 compare
carbon source L-Glutamic (C) +6.0 +17.2 compare
stress 1-Pentanol 0.3 vol% +6.1 +20.0 compare