Fitness data for PP_1565 in Pseudomonas putida KT2440

Phage portal protein, HK97 family
SEED: Phage portal protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.8 -2.8 compare
phage moi 100 Time6-phageFRS -0.7 -3.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.5 +2.2 compare
carbon source L-Leucine (C) +0.6 +2.6 compare
temperature Growth at 25C +0.6 +2.0 compare
carbon source Butanol (C) +0.6 +3.7 compare
carbon source Octanoic (C) +0.6 +4.0 compare
carbon source L-Proline (C) +0.7 +4.5 compare
carbon source Decanoic (C) +0.7 +4.4 compare
carbon source 1-Pentanol (C) +0.8 +4.4 compare
carbon source Hexanoic (C) +0.8 +4.1 compare
nitrogen source 2,6-diaminopimelic (N) +0.8 +2.5 compare
carbon source 1,3-Butandiol (C) +0.9 +4.7 compare
phage P. putida Sci small MOI 0.1 +0.9 +3.2 compare
carbon source pyruvate (C) +1.2 +7.1 compare
carbon source Lauric (C) +1.2 +6.7 compare
carbon source Myristic (C) +1.3 +6.0 compare
carbon source D-Glucose (C) 2.5 mM +1.3 +9.7 compare
carbon source Valeric (C) +1.5 +5.9 compare