Fitness data for PP_1536 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
nitrogen source nitrogen source nitrite 1mM -1.8 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.6 -3.2 compare
pH pH 7 -1.6 -2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -1.6 -3.9 compare
no stress control Growth with no stress -1.6 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -1.5 -2.7 compare
temperature shift Temperature shift 30_to_4; with MOPS -1.4 -3.9 compare
temperature shift Temperature shift 30_to_21; with MOPS -1.3 -1.7 compare
temperature shift Temperature shift 10_to_30; with MOPS -1.2 -1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.1 -2.8 compare
carbon source butyrate (C) -1.1 -1.4 compare
stress Growth with Chloride 500 mM; with MOPS -1.1 -2.4 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay -1.1 -1.4 compare
nitrogen source Ammonium chloride (N) -1.1 -1.4 compare
carbon source Crotonic (C) -1.0 -2.4 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.0 +1.6 compare
carbon source D-Glucuronic gamma lactone (C) +1.0 +2.9 compare
carbon source Succinic Acid (C) +1.1 +3.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.2 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.3 +2.1 compare