Fitness data for PP_1521 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -1.8 -3.5 compare
phage P. putida Missley MOI 0.1 -1.8 -1.5 compare
phage P. putida South MOI 10 -1.3 -1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.2 -2.4 compare
phage P. putida Sci small MOI 0.1 -1.0 -1.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.0 -2.6 compare
nitrogen source D-2-Aminobutyric (N) -1.0 -1.6 compare
temperature Growth at 30C; with MOPS -1.0 -2.0 compare
carbon source 4-Hydroxybenzoic Acid (C) -0.9 -2.8 compare
pH Growth at pH6 and (C) Trisodium citrate -0.9 -1.3 compare
phage P. putida PUT 7 MOI 1 -0.9 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.9 -2.8 compare
carbon source L-Leucine (C) -0.9 -2.3 compare
pH Growth at pH6 and (C) Trisodium citrate -0.8 -1.0 compare
stress R2A with Fusaric 480 ug/mL -0.8 -2.0 compare
phage P. putida PUT10 MOI 10 -0.8 -1.5 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) -0.8 -2.3 compare
nitrogen source 2,6-diaminopimelic (N) +0.8 +1.9 compare
pH Growth at pH6 and (C) D-Glucose +1.0 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.2 +2.2 compare