Fitness data for PP_1502 in Pseudomonas putida KT2440

OmpA family protein
SEED: Outer membrane lipoprotein omp16 precursor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source ferulate (C); with MOPS -1.3 -2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.1 -3.5 compare
phage P. putida Missley MOI 0.1 -0.9 -2.1 compare
carbon source L-tyrosine 5 mM (C) -0.8 -2.9 compare
nitrogen source Propiolactam (N) -0.8 -2.5 compare
carbon source carbon source 4-vinylphenol 0.01 mM -0.7 -1.9 compare
carbon source Valeric (C) -0.7 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -1.8 compare
nitrogen source Hydantoin (N) -0.6 -2.9 compare
phage P. putida South MOI 10 -0.6 -1.5 compare
pH Growth at pH7 and (C) Trisodium citrate -0.6 -1.5 compare
pH pH 6 -0.6 -1.5 compare
pH Growth at pH8 and (C) Trisodium citrate -0.6 -2.5 compare
phagefrs Time6-FRS +0.6 +3.3 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol +0.6 +2.4 compare
carbon source D-Glucose (C); with MOPS +0.6 +2.4 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.7 +3.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.7 +2.1 compare
stress R2A with Fusaric 240 ug/mL +0.7 +2.3 compare
temperature Growth at 30C; with MOPS +0.9 +3.2 compare