Fitness data for PP_1486 in Pseudomonas putida KT2440

polyamine ABC transporter, periplasmic polyamine-binding protein
SEED: ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1)
KEGG: putative spermidine/putrescine transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
carbon source 1,3-Butandiol (C) -0.6 -2.0 compare
pH Growth at pH7 and (C) D-Glucose -0.6 -1.9 compare
phage P. putida PUT 7 MOI 1 -0.5 -2.1 compare
carbon source DL-3-Hydroxyisobutyric (C) -0.4 -2.2 compare
phage P. putida South MOI 0.1 -0.4 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.4 -1.9 compare
carbon source D-Glucose (C) -0.4 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -0.4 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.4 -2.4 compare
temperature shift Temperature shift 30_to_10; with MOPS -0.4 -2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.4 -1.6 compare
stress R2A with Fusaric 240 ug/mL -0.3 -2.0 compare
nitrogen source 2,6-diaminopimelic (N) +0.3 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.3 compare
carbon source 3-Hydroxyhexanoic (C) +0.4 +2.4 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.4 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +2.2 compare
carbon source ferulate (C); with MOPS +0.4 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +2.7 compare