Fitness data for PP_1484 in Pseudomonas putida KT2440

predicted polyamine ABC transporter, ATP-binding protein
SEED: Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1)
KEGG: putative spermidine/putrescine transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source ferulate (C); with MOPS -1.0 -2.7 compare
phage P. putida Missley MOI 0.1 -0.8 -2.1 compare
carbon source D-Glucose (C) -0.8 -2.5 compare
phage P. putida Sci small MOI 0.1 -0.8 -1.8 compare
phage P. putida Sci Big MOI 0.1 -0.7 -2.3 compare
carbon source Trisodium citrate (C) -0.7 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.6 -1.4 compare
carbon source ferulate (C); with MOPS -0.5 -1.7 compare
phage P. putida PUT10 MOI 1 -0.5 -1.9 compare
pH Growth at pH6 and (C) Trisodium citrate -0.5 -1.6 compare
temperature shift Temperature shift 30_to_4 -0.5 -2.2 compare
r2a control R2A control -0.5 -1.5 compare
carbon source Valeric (C) +0.5 +2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.5 +1.5 compare
nitrogen source D-2-Aminobutyric (N) +0.5 +1.7 compare
nitrogen source nitrogen source nitrite 0.5mM +0.5 +2.1 compare
pH Growth at pH7 and (C) D-Glucose +0.5 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +2.1 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.8 +2.4 compare