Fitness data for PP_1473 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: FIG00953680: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
pH Growth at pH6 and (C) Trisodium citrate -1.5 -3.3 compare
carbon source Sebacic (C) -1.3 -4.0 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM -1.3 -3.6 compare
nitrogen source nitrogen source nitrite 1mM -1.2 -4.1 compare
phage P. putida PUT 7 MOI 1 -1.2 -1.5 compare
nitrogen source Propandiamine (N) -1.2 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.1 -1.9 compare
phage P. putida Sci Big MOI 0.1 -1.0 -1.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.0 -2.4 compare
nitrogen source nitrogen source Ammonium chloride 20mM -0.9 -2.3 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. -0.9 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.9 -1.6 compare
carbon source Acetate Carbon Source (20mM) -0.9 -2.0 compare
carbon source Sebacic (C) -0.9 -2.8 compare
phage P. putida Sci small MOI 0.1 +0.8 +1.8 compare
pH D-Glucose (C) pH 7 +0.8 +3.6 compare
carbon source D-Glucose (C); with MOPS +0.9 +2.9 compare
pH D-Glucose (C) pH 6 +0.9 +2.3 compare
carbon source acetate (C) +0.9 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.0 +2.2 compare