Fitness data for PP_1458 in Pseudomonas putida KT2440

putative inner membrane metabolite transport protein YhjE
SEED: Permeases of the major facilitator superfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
nitrogen source 2,6-diaminopimelic (N) -0.6 -2.0 compare
carbon source D-Glucose (C); with MOPS -0.6 -2.2 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.5 -2.5 compare
carbon source D-Glucose (C) -0.4 -2.1 compare
pH Growth at pH8 and (C) D-Glucose -0.4 -1.9 compare
pH Growth at pH9 and (C) Trisodium citrate -0.4 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.4 -2.2 compare
phage P. putida South MOI 0.1 -0.4 -2.4 compare
nitrogen source Urea (N); with MOPS -0.4 -1.7 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.4 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.4 -2.2 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.4 +1.8 compare
carbon source ferulate (C); with MOPS +0.4 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.9 compare
nitrogen source DL-2-Aminobutyric (N) +0.4 +3.4 compare
carbon source Tween 20 (C) +0.4 +2.2 compare
nitrogen source DL-2-Aminobutyric (N) +0.5 +3.6 compare
nitrogen source D-2-Aminobutyric (N) +0.6 +2.5 compare
nitrogen source D-2-Aminobutyric (N) +0.7 +2.8 compare