Fitness data for PP_1457 in Pseudomonas putida KT2440

Phosphoribosylglycinamide formyltransferase 2
SEED: Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-)
KEGG: phosphoribosylglycinamide formyltransferase 2

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source acetate (C) -0.7 -1.7 compare
carbon source L-Leucine (C) -0.6 -2.8 compare
nitrogen source NAG (N); with MOPS -0.5 -1.2 compare
carbon source D-Glucose (C) with 20AA_mix_minus_Cys -0.5 -2.2 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -0.5 -2.2 compare
time series Timeseries; MIN condition; Bioreplicate 1; Time 7hrs; Measurement -0.5 -2.3 compare
carbon source D-Lysine 10 mM (C) -0.5 -2.1 compare
nitrogen source D-2-Aminobutyric (N) -0.4 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.4 +1.0 compare
nitrogen source Ammonium chloride and TNT (N) +0.4 +2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +0.4 +3.0 compare
nitrogen source nitrogen source nitrite 0.5mM +0.4 +2.0 compare
nitrogen source TNT (N) +0.4 +2.6 compare
nitrogen source nitrogen source nitrite 1mM +0.4 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.6 compare
stress Growth with Chloride 500 mM; with MOPS +0.5 +1.8 compare
nitrogen source TNT (N) +0.5 +2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.6 +3.0 compare
pH Growth at pH7 and (C) D-Glucose +0.7 +2.6 compare