Fitness data for PP_1446 in Pseudomonas putida KT2440

TonB-dependent receptor
SEED: Zinc-regulated outer membrane receptor
KEGG: iron complex outermembrane recepter protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
pH Growth at pH7 and (C) Trisodium citrate -0.7 -2.7 compare
temperature Growth at 25C -0.6 -2.5 compare
carbon source L-Lysine (C) -0.5 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -2.4 compare
pH pH 5 -0.5 -2.5 compare
pH pH 8 -0.5 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.5 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml -0.5 -3.0 compare
carbon source carbon source Bisabolene 48.9 mM -0.5 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.5 compare
carbon source ferulate (C); with MOPS -0.5 -2.1 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -2.2 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM -0.4 -2.1 compare
carbon source carbon source 3-O-methyl-glucose 10 mM -0.4 -1.9 compare
nitrogen source D-2-Aminobutyric (N) -0.4 -1.9 compare
pH pH 9 -0.4 -1.9 compare
pH Growth at pH7 and (C) D-Glucose +0.4 +1.7 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM +0.4 +2.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.9 compare