Fitness data for PP_1427 in Pseudomonas putida KT2440

RNA polymerase sigma E factor
SEED: RNA polymerase sigma-H factor AlgT
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
nitrogen source D-2-Aminobutyric (N) -1.9 -4.5 compare
carbon source Delta-Decalactone (C) -1.6 -6.2 compare
carbon source 2,3-Butanediol (C) -1.4 -6.0 compare
phage P. put South MOI 10 -1.3 -3.3 compare
carbon source 1,2-Propanediol (C) -1.3 -6.8 compare
nitrogen source D-2-Aminobutyric (N) -1.3 -3.9 compare
phage P. putida South MOI 10 -1.2 -3.8 compare
carbon source 1,2-Propanediol (C) -1.2 -5.4 compare
carbon source Delta-Decalactone (C) -1.2 -3.9 compare
carbon source Valerolactone (C) -1.2 -4.4 compare
carbon source Valerolactone (C) -1.2 -4.4 compare
carbon source Decanoic (C) -1.1 -5.5 compare
carbon source Delta-Nonalactone (C) -1.1 -4.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.0 -3.6 compare
stress LB_noSalt with Chloride 1100 mM -1.0 -6.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.0 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.0 -3.0 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +1.3 +7.6 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +1.5 +7.9 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +1.8 +9.4 compare