Fitness data for PP_1425 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: FIG00955375: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
nitrogen source NAG (N); with MOPS -1.2 -2.4 compare
phage P. putida Sci small MOI 0.1 -0.9 -1.4 compare
phage P. putida PUT 7 MOI 1 -0.8 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -2.9 compare
phage P. putida Sci Big MOI 0.1 -0.7 -2.1 compare
pH D-Glucose (C) pH 6.5 -0.7 -2.2 compare
pH Growth at pH6 and (C) D-Glucose -0.6 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -2.1 compare
pH Valerolactone (C) pH 6.5 -0.5 -1.7 compare
carbon source DL-3-Hydroxyisobutyric (C) -0.5 -1.5 compare
temperature shift Temperature shift 10_to_30; with MOPS -0.5 -1.8 compare
carbon source ferulate (C); with MOPS +0.5 +1.3 compare
pH Growth at pH6 and (C) D-Glucose +0.5 +1.3 compare
reactor 24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. +0.5 +2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.5 +1.4 compare
nitrogen source nitrate (N) +0.5 +1.4 compare
nitrogen source nitrogen source nitrate 20mM +0.5 +1.9 compare
pH Growth at pH7 and (C) D-Glucose +0.5 +1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.6 +2.3 compare
nitrogen source Ammonium chloride (N); with MOPS +0.6 +2.9 compare