Fitness data for PP_1401 in Pseudomonas putida KT2440

C4-dicarboxylate transport transcriptional regulatory protein
SEED: Nitrogen regulation protein NR(I)
KEGG: two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
carbon source Glutaric (C) -5.2 -6.2 compare
carbon source Glutaric (C) -4.7 -7.8 compare
carbon source 1,5-Pentanediol (C) -2.9 -8.6 compare
carbon source a-Ketoglutaric (C) -2.6 -6.4 compare
carbon source Valerolactone (C) -2.2 -5.4 compare
carbon source 1,5-Pentanediol (C) -1.8 -6.9 compare
carbon source Valerolactone (C) -1.5 -4.4 compare
pH pH 4 -1.2 -3.1 compare
pH Valerolactone (C) pH 6.5 -1.1 -2.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -1.0 -3.0 compare
carbon source carbon source 4-vinylphenol 0.01 mM -1.0 -3.3 compare
pH Valerolactone (C) pH 6.5 -0.9 -3.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.9 -1.9 compare
pH pH 9 -0.9 -3.6 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -0.9 -2.3 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 -0.8 -3.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.8 -3.0 compare
carbon source carbon source Bisabolene 48.9 mM -0.8 -2.6 compare
carbon source carbon source D-Glucose 55.5 mM -0.8 -2.2 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol -0.8 -1.8 compare