Fitness data for PP_1389 in Pseudomonas putida KT2440

Oxaloacetate decarboxylase
SEED: carboxyphosphonoenolpyruvate phosphonomutase, putative
KEGG: carboxyvinyl-carboxyphosphonate phosphorylmutase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source carbon source 3-O-methyl-glucose 50 mM -1.1 -3.1 compare
no phage control Time6-nophage -1.1 -3.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.1 -3.6 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.0 -3.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.0 -2.9 compare
pH Growth at pH6 and (C) D-Glucose -0.9 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.8 -2.8 compare
mixed community Putida_ML5X with Paraburkholderia sabiae T6SS mutant -0.8 -3.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.8 -3.2 compare
temperature Growth at 30C; with MOPS -0.7 -1.9 compare
no phage control Time6-nophage -0.7 -3.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.7 -3.0 compare
phage moi 100 Time6-phageFRS -0.7 -2.6 compare
phage P. putida Sci small MOI 0.1 -0.7 -1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.7 -2.9 compare
phagefrs Time6-FRS -0.7 -3.4 compare
carbon source Crotonic (C) +0.6 +2.0 compare
no stress control Growth with no stress +0.7 +3.3 compare
phage PUT8 MOI 0.1 +0.9 +4.5 compare
phage PUT 8 MOI 1 +0.9 +3.7 compare