Fitness data for PP_1354 in Pseudomonas putida KT2440

putative multidrug efflux MFS transporter
SEED: Bicyclomycin resistance protein
KEGG: MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.0 -2.9 compare
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL -0.6 -2.8 compare
temperature shift Temperature shift 30_to_25 -0.6 -2.9 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.5 -1.8 compare
nitrogen source Propandiamine (N) -0.5 -2.1 compare
nitrogen source no extra (N); with MOPS -0.5 -2.3 compare
temperature Growth at 25C -0.5 -2.0 compare
carbon source ferulate (C); with MOPS -0.5 -1.7 compare
nitrogen source 2,6-diaminopimelic (N) -0.5 -1.8 compare
pH Growth at pH6 and (C) D-Glucose -0.4 -1.4 compare
supernatant Supernatant; Burkholderia bryophila 376MFSha3.1 spent media 0.5x -0.4 -2.6 compare
pH Growth at pH6 and (C) D-Glucose -0.4 -1.4 compare
phage P. putida South MOI 1 +0.4 +2.8 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.5 +2.2 compare
phage PUT 8 MOI 1 +0.5 +1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.5 +2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.6 +2.8 compare
phage P. putida Sci small MOI 0.1 +0.6 +2.0 compare
phage P. putida Sci Big MOI 0.1 +0.6 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.1 compare