Fitness data for PP_1295 in Pseudomonas putida KT2440

ATP-dependent RNA helicase RhlB
SEED: ATP-dependent RNA helicase RhlB
KEGG: ATP-dependent RNA helicase RhlB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source 3-methyl-2-oxopentanoic (C) -0.7 -4.6 compare
carbon source 3-methyl-2-oxopentanoic (C) -0.7 -4.4 compare
reactor 48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO. -0.7 -3.0 compare
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM -0.7 -3.8 compare
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM -0.6 -3.7 compare
nitrogen source nitrogen source nitrite 0.5mM -0.6 -2.9 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. -0.6 -3.2 compare
phage P. putida South MOI 1 -0.6 -3.4 compare
nitrogen source NAG (N); with MOPS -0.6 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.6 -3.3 compare
carbon source DL-3-Hydroxybutyric (C) -0.6 -3.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.5 -3.1 compare
pH Growth at pH8 and (C) Trisodium citrate -0.5 -2.7 compare
phage P. put South MOI 1 -0.5 -3.2 compare
phage P. putida PUT10 MOI 0.1 -0.5 -3.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.5 -2.3 compare
nitrogen source Propiolactam (N) -0.5 -3.0 compare
carbon source DL-2-Aminoadipic 10 mM (C) +0.5 +3.9 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +3.4 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +1.1 +6.7 compare