Fitness data for PP_1280 in Pseudomonas putida KT2440

Probable alginate O-acetylase AlgI
SEED: Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
phage P. put PUT 10 MOI 1 -0.4 -3.2 compare
phage P. putida PUT10 MOI 10 -0.4 -2.5 compare
phage P. put PUT 10 MOI 0.1 -0.4 -2.5 compare
phage P. put South MOI 1 -0.3 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.3 -1.9 compare
carbon source butyrate (C) -0.3 -1.6 compare
nitrogen source D-2-Aminobutyric (N) -0.3 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.3 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.6 compare
carbon source Delta-Decalactone (C) +0.3 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.6 compare
stress Growth with Chloride 500 mM; with MOPS +0.3 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.3 +1.6 compare
phage P. put South MOI 10 +0.3 +1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.3 +2.1 compare
pH Growth at pH6 and (C) D-Glucose +0.3 +1.5 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.3 +1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +0.3 +2.2 compare