Fitness data for PP_1237 in Pseudomonas putida KT2440

4-hydroxy-tetrahydrodipicolinate synthase
SEED: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)
KEGG: dihydrodipicolinate synthase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 4.0)


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group condition fitness t score  
r2a control R2A control -6.0 -3.2 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol -6.0 -2.8 compare
carbon source Decanoic (C) -5.8 -3.8 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -5.4 -2.7 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -5.3 -3.7 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -5.3 -3.1 compare
phage PUT8 MOI 0.1 -5.3 -2.4 compare
phage PUT 8 MOI 1 -5.1 -1.7 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 -4.9 -3.3 compare
carbon source Octanoic (C) -4.5 -3.3 compare
time series Timeseries; NC condition; Bioreplicate 1; Time 4hrs; Measurement -4.4 -3.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -4.3 -2.1 compare
carbon source Decanoic (C) -4.3 -3.8 compare
phage P. putida Sci small MOI 0.1 -4.2 -1.3 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -4.1 -2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -4.1 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -4.1 -1.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -4.1 -1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -4.0 -1.8 compare
carbon source D-Lysine 10 mM (C) +4.2 +6.9 compare