Fitness data for PP_1216 in Pseudomonas putida KT2440

Holliday junction ATP-dependent DNA helicase RuvA
SEED: Holliday junction DNA helicase RuvA
KEGG: holliday junction DNA helicase RuvA

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 3.2)


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group condition fitness t score  
phage P. put South MOI 10 -5.3 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -5.1 -3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -4.9 -3.4 compare
phage PUT 8 MOI 1 -4.9 -2.4 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) -4.8 -3.3 compare
carbon source benzoic (C) -4.8 -3.3 compare
nitrogen source Urea (N); with MOPS -4.5 -3.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -4.4 -4.5 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -4.2 -3.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -4.2 -3.7 compare
carbon source 3-methyl-1-butanol (C) -4.1 -2.8 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -3.9 -3.8 compare
carbon source D-Lysine 10 mM (C) -3.6 -3.6 compare
carbon source 3-methyl-1-butanol (C) -3.5 -3.4 compare
nitrogen source L-Cysteine (N) -3.5 -4.1 compare
carbon source 1,5-Pentanediol (C) -3.4 -3.9 compare
stress Growth with Chloride 500 mM; with MOPS -3.3 -3.3 compare
phage P. putida South MOI 0.1 -3.3 -3.3 compare
carbon source Oleic (C) -3.3 -3.2 compare
carbon source D-Glucose (C); with MOPS -3.2 -2.6 compare