Fitness data for PP_1215 in Pseudomonas putida KT2440

Crossover junction endodeoxyribonuclease RuvC
SEED: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
KEGG: crossover junction endodeoxyribonuclease RuvC

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 4.2)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -6.5 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -5.8 -3.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -5.8 -3.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -5.6 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -4.9 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -4.8 -2.0 compare
carbon source 1,3-Butandiol (C) -4.8 -3.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -4.8 -3.3 compare
nitrogen source L-Proline (N) -4.7 -3.2 compare
carbon source 3-methyl-1-butanol (C) -4.7 -3.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -4.6 -1.8 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) -4.5 -1.7 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) -4.5 -2.3 compare
nitrogen source L-Leucine (N) -4.4 -3.0 compare
phage P. putida South MOI 10 -4.4 -1.8 compare
stress Growth with Chloride 500 mM; with MOPS -4.3 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -4.3 -3.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -4.2 -2.9 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM -4.2 -2.9 compare
pH Growth at pH7 and (C) D-Glucose -4.2 -1.5 compare