Fitness data for PP_1208 in Pseudomonas putida KT2440

conserved protein of unknown function, SlyX family
SEED: Protein SlyX
KEGG: SlyX protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.1)


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group condition fitness t score  
carbon source Tween 20 (C) -6.7 -2.5 compare
pH Growth at pH6 and (C) D-Glucose -6.0 -2.3 compare
nitrogen source NAG (N); with MOPS -5.7 -2.0 compare
carbon source butyrate (C) -4.0 -2.7 compare
phage P. putida Sci small MOI 0.1 -3.8 -1.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -3.7 -2.4 compare
carbon source D-Glucose (C) with 20AA_mix_minus_Cys -3.6 -2.8 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -2.9 -1.4 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) -2.8 -2.9 compare
pH Growth at pH7 and (C) D-Glucose -2.7 -1.7 compare
pH Growth at pH9 and (C) Trisodium citrate -2.6 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -2.6 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -2.6 -1.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.5 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -2.3 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -2.2 -1.6 compare
carbon source carbon source 4-vinylphenol 0.01 mM -2.1 -1.1 compare
reactor 48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO. -2.1 -1.4 compare
temperature Growth at 30C; with MOPS -2.1 -1.6 compare
carbon source D-Galacturonic Acid (C) -2.1 -2.8 compare