Fitness data for PP_1206 in Pseudomonas putida KT2440

basic-amino-acid specific porin OprD
SEED: Outer membrane porin, OprD family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.4)


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group condition fitness t score  
micoeukaryotes Acanthamoeba sp., muxed culture-2 -2.8 -10.2 compare
micoeukaryotes C.elegans, mixed culture-1 -2.6 -7.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -2.3 -5.9 compare
micoeukaryotes Dictyostellum sp.mixed culture-2 -2.1 -7.8 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) -2.1 -7.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -2.0 -5.6 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -1.9 -4.5 compare
nitrogen source 3,5-Dinitrosalicylic (N) -1.7 -6.8 compare
carbon source D-Glucose (C); with MOPS -1.7 -4.5 compare
micoeukaryotes C.elegans, mixed culture-2 -1.6 -6.1 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 -1.6 -7.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.5 -3.5 compare
nitrogen source NAG (N); with MOPS -1.4 -3.5 compare
carbon source D-Glucose (C) +1.5 +8.1 compare
no stress control Growth with no stress +1.6 +9.1 compare
carbon source D-Glucose (C) +1.8 +8.0 compare
no stress control Growth with no stress +1.9 +10.0 compare
carbon source D-Glucose (C) +1.9 +8.7 compare
no stress control Growth with no stress +2.0 +10.8 compare
carbon source Delta-Nonalactone (C) +2.5 +14.8 compare