Fitness data for PP_1173 in Pseudomonas putida KT2440

porin-like protein
SEED: PhaK-like protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.6 -2.3 compare
pH Growth at pH8 and (C) D-Glucose -0.5 -2.1 compare
pH Growth at pH9 and (C) Trisodium citrate -0.4 -2.2 compare
pH pH 4 -0.4 -2.1 compare
carbon source carbon source D-Glucose 55.5 mM -0.4 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.7 compare
pH pH 8 -0.4 -1.9 compare
nitrogen source Urea (N); with MOPS -0.4 -1.7 compare
carbon source D-Galacturonic Acid (C) -0.3 -2.4 compare
pH pH 6 -0.3 -1.4 compare
carbon source carbon source 4-vinylphenol 0.01 mM -0.3 -1.6 compare
carbon source D-Galacturonic Acid (C) -0.3 -2.1 compare
carbon source carbon source 3-O-methyl-glucose 10 mM -0.3 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.3 +1.5 compare
nitrogen source Propiolactam (N) +0.4 +2.4 compare
carbon source D-Glucuronic Acid (C) +0.4 +2.8 compare
nitrogen source nitrogen source nitrite 0.5mM +0.4 +2.1 compare
nitrogen source Urea (N) +0.4 +2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.4 +1.9 compare
phage P. putida Sci small MOI 0.1 +0.5 +2.4 compare