Fitness data for PP_1171 in Pseudomonas putida KT2440

Uronate dehydrogenase (EC 1.1.1.203) (from data)
Original annotation: uronate dehydrogenase
SEED: Uronate dehydrogenase (EC 1.1.1.203)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source D-Galacturonic Acid (C) -6.1 -10.1 compare
carbon source D-Glucuronic gamma lactone (C) -6.0 -10.8 compare
carbon source D-Galacturonic Acid (C) -5.9 -9.9 compare
carbon source D-Glucuronic gamma lactone (C) -5.6 -11.3 compare
carbon source D-Glucuronic Acid (C) -2.7 -13.1 compare
carbon source Rhamnogalacturonan - from potato (C) -1.7 -7.3 compare
carbon source Rhamnogalacturonan - from potato (C) -1.6 -7.8 compare
pH Valerolactone (C) pH 6.5 -0.5 -2.1 compare
micoeukaryotes C.elegans, mixed culture-2 -0.5 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -2.0 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.4 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 -2.4 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM -0.4 -2.2 compare
carbon source carbon source 4-vinylphenol 0.01 mM -0.4 -2.0 compare
pH Growth at pH7 and (C) D-Glucose -0.4 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.5 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.5 +2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.5 +1.7 compare
nitrogen source D-2-Aminobutyric (N) +0.8 +2.9 compare