Fitness data for PP_1165 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Aldose 1-epimerase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source D-Galacturonic Acid (C) -4.7 -15.2 compare
carbon source D-Galacturonic Acid (C) -4.5 -14.1 compare
carbon source Rhamnogalacturonan - from potato (C) -1.5 -8.9 compare
carbon source Rhamnogalacturonan - from potato (C) -1.3 -6.6 compare
carbon source D-Glucuronic gamma lactone (C) -1.2 -7.0 compare
carbon source D-Glucuronic gamma lactone (C) -1.2 -6.9 compare
carbon source D-Glucuronic Acid (C) -0.6 -4.0 compare
temperature Growth at 30C; with MOPS -0.4 -2.2 compare
pH Growth at pH7 and (C) Trisodium citrate -0.4 -1.5 compare
temperature shift Temperature shift 30_to_4; with MOPS -0.4 -2.3 compare
carbon source Lauric (C) -0.4 -2.2 compare
pH pH 4 +0.4 +2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.4 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.6 compare
reactor 24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. +0.4 +2.5 compare
phage P. putida South MOI 10 +0.4 +2.0 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.5 +2.0 compare
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL +0.5 +2.8 compare
pH pH 5 +0.5 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +3.2 compare