Fitness data for PP_1155 in Pseudomonas putida KT2440

YaiC/YhcK/ArdA family protein
SEED: GGDEF domain protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
micoeukaryotes Tetrahymena sp., Mixed culture-1 -1.6 -4.5 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -1.2 -1.9 compare
r2a control R2A control -0.7 -2.3 compare
nitrogen source nitrogen source nitrite 0.5mM -0.6 -2.1 compare
pH Growth at pH9 and (C) Trisodium citrate -0.6 -1.8 compare
carbon source D-Glucose (C) -0.6 -1.9 compare
carbon source ferulate (C); with MOPS -0.5 -1.7 compare
carbon source 3-Hydroxydecanoic (C) -0.5 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +0.5 +2.8 compare
nitrogen source D-2-Aminobutyric (N) +0.5 +1.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.5 +1.8 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +1.7 compare
phage P. put PUT 10 MOI 1 +0.5 +2.6 compare
phage P. putida South MOI 10 +0.6 +2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +3.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.6 +2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.7 +2.5 compare
nitrogen source NAG (N); with MOPS +0.7 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +3.0 compare