Fitness data for PP_1136 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: fibronectin type III domain protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
pH Growth at pH6 and (C) Trisodium citrate -0.4 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.4 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.3 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.3 -2.0 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM -0.3 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.3 -2.2 compare
carbon source L-Leucine (C) -0.3 -1.8 compare
carbon source Myristic (C) +0.3 +1.5 compare
nitrogen source nitrogen source nitrite 1mM +0.3 +1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.3 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.5 compare
nitrogen source 2,6-diaminopimelic (N) +0.4 +2.1 compare
nitrogen source D-2-Aminobutyric (N) +0.4 +1.7 compare
carbon source Valerolactone (C) +0.4 +2.1 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) +0.4 +2.1 compare
phage P. putida PUT 7 MOI 1 +0.5 +2.7 compare
phage PUT 8 MOI 1 +0.5 +2.1 compare
phage P. putida Missley MOI 0.1 +0.6 +2.8 compare