Fitness data for PP_1119 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: UPF0225 protein YchJ
KEGG: SEC-C motif domain protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.2 -3.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.6 -2.3 compare
carbon source pyruvate (C) -0.6 -2.4 compare
temperature shift Temperature shift 30_to_21; with MOPS -0.6 -1.9 compare
carbon source 3-methyl-3-buten-1-ol 0.1 vol% (C) +0.6 +3.4 compare
carbon source Trisodium citrate (C) +0.6 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.2 compare
phage P. putida Sci small MOI 0.1 +0.6 +2.2 compare
carbon source 4-Hydroxyvalerate (C) (40mM) +0.6 +3.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +2.7 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) +0.6 +2.4 compare
nitrogen source L-Methionine (N) +0.6 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.6 +1.6 compare
carbon source 4-Hydroxyvalerate (C) (40mM) +0.6 +3.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +3.3 compare
phage P. putida Sci small MOI 0.1 +0.7 +2.5 compare
phage P. put South MOI 10 +0.8 +2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.9 +2.9 compare
carbon source Delta-Nonalactone (C) +1.3 +6.3 compare