Fitness data for PP_1116 in Pseudomonas putida KT2440

Site-specific recombinase, resolvase family
SEED: site-specific recombinase, resolvase family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.7 -3.7 compare
nitrogen source 2,6-diaminopimelic (N) -1.0 -3.4 compare
nitrogen source Ammonium chloride (N) -0.9 -2.2 compare
nitrogen source 2,6-diaminopimelic (N) -0.9 -2.7 compare
pH Growth at pH9 and (C) Trisodium citrate -0.8 -1.2 compare
nitrogen source nitrate (N) -0.7 -2.0 compare
pH D-Glucose (C) pH 6 -0.7 -2.3 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.7 -1.4 compare
carbon source L-Leucine (C) -0.6 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -1.7 compare
pH Valerolactone (C) pH 6.5 +0.6 +2.2 compare
mixed community control Putida_ML5X alone +0.6 +2.9 compare
nitrogen source nitrogen source nitrite 1mM +0.6 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.7 +1.6 compare
carbon source L-Lysine (C) +0.7 +2.8 compare
phage P. putida PUT 7 MOI 1 +0.7 +2.7 compare
phage P. putida Missley MOI 0.1 +0.7 +2.9 compare
phage P. putida Sci small MOI 0.1 +0.7 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +2.4 compare
nitrogen source D-2-Aminobutyric (N) +0.8 +1.6 compare