Fitness data for PP_1114 in Pseudomonas putida KT2440

SEC-C domain protein
SEED: Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
pH Growth at pH6 and (C) D-Glucose -1.9 -2.9 compare
nitrogen source 2,6-diaminopimelic (N) -1.4 -1.9 compare
carbon source D-Glucose (C) -1.3 -2.1 compare
nitrogen source NAG (N); with MOPS -1.3 -1.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.2 -3.3 compare
pH Growth at pH7 and (C) Trisodium citrate -1.1 -1.6 compare
carbon source D-Fructose (C) -1.1 -2.5 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -1.0 -2.9 compare
temperature shift Temperature shift 10_to_25; with MOPS -1.0 -3.3 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.0 -1.9 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) -1.0 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.9 -1.8 compare
nitrogen source Urea (N) -0.9 -1.9 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.9 -2.0 compare
carbon source Butanol (C) -0.9 -3.3 compare
temperature shift Temperature shift 10_to_30; with MOPS -0.8 -2.9 compare
carbon source D-Glucose (C); with MOPS -0.8 -1.4 compare
carbon source Hexanoic (C) -0.8 -1.5 compare
nitrogen source nitrogen source nitrite 1mM +0.8 +1.9 compare
phage P. put South MOI 10 +0.9 +1.9 compare