Fitness data for PP_1103 in Pseudomonas putida KT2440

ATP-dependent helicase, DEAD box family
SEED: FIG003033: Helicase domain protein
KEGG: ATP-dependent helicase Lhr and Lhr-like helicase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
pH D-Glucose (C) pH 6 -0.6 -2.8 compare
pH Valerolactone (C) pH 6.5 -0.3 -2.0 compare
carbon source 5-Hydroxydodecanoate (C) -0.3 -2.2 compare
temperature Growth at 25C; with MOPS -0.3 -1.5 compare
carbon source D-Glucose (C) -0.3 -1.6 compare
r2a control R2A control -0.3 -2.2 compare
pH Growth at pH6 and (C) D-Glucose -0.3 -1.2 compare
phage P. putida South MOI 10 +0.3 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 +1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.3 +1.4 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.3 +1.8 compare
pH pH 9 +0.3 +1.6 compare
phage P. putida South MOI 0.1 +0.3 +2.2 compare
pH Growth at pH6 and (C) Trisodium citrate +0.4 +1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.4 +2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.4 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.7 compare
pH Growth at pH7 and (C) Trisodium citrate +0.5 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.7 compare
carbon source D-Glucose (C); with MOPS +0.6 +3.1 compare