Fitness data for PP_1092 in Pseudomonas putida KT2440

DNA glycosylase/apyrimidinic (AP) lyase specific for damaged pyrimidinic sites
SEED: Endonuclease III (EC 4.2.99.18)
KEGG: endonuclease III

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)

group	condition	fitness	t score
carbon source	3-methyl-1-butanol (C)	-1.4	-7.0	compare
carbon source	3-methyl-1-butanol (C)	-0.8	-5.4	compare
nitrogen source	D-2-Aminobutyric (N)	-0.6	-2.2	compare
pH	Growth at pH9 and (C) Trisodium citrate	-0.5	-2.3	compare
nitrogen source	2,6-diaminopimelic (N)	-0.5	-2.1	compare
stress	Growth with Chloride 500 mM; with MOPS	-0.5	-2.2	compare
nitrogen source	nitrogen source nitrite 1mM	-0.4	-1.6	compare
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.4	-1.4	compare
nitrogen source	NAG (N); with MOPS	-0.4	-1.2	compare
carbon source	3-methyl-1-butanol 0.1 vol% (C)	-0.4	-1.7	compare
carbon source	Valeric (C)	-0.4	-1.5	compare
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-0.3	-1.8	compare
carbon source	DL-3-Hydroxyisobutyric (C)	-0.3	-1.7	compare
pH	Growth at pH7 and (C) Trisodium citrate	-0.3	-1.4	compare
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	+0.3	+1.4	compare
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.3	+1.7	compare
carbon source	D-Glucose (C) 10 mM	+0.4	+2.5	compare
phage	P. putida South MOI 10	+0.4	+1.9	compare
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.4	+1.9	compare
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days	+0.5	+3.0	compare