Fitness data for PP_1065 in Pseudomonas putida KT2440

membrane protein required for efficient alginate biosynthesis
SEED: Membrane protein glpM
KEGG: membrane protein GlpM

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
phage P. putida Sci Big MOI 0.1 -0.5 -2.2 compare
pH Growth at pH7 and (C) D-Glucose -0.5 -1.8 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM -0.5 -2.4 compare
carbon source L-Leucine (C) -0.4 -2.0 compare
phage PUT8 MOI 10 -0.4 -2.5 compare
phage P. putida PUT10 MOI 1 -0.4 -2.7 compare
phage P. putida Missley MOI 0.1 -0.4 -1.8 compare
temperature shift Temperature shift 30_to_21; with MOPS -0.4 -1.6 compare
nitrogen source D-2-Aminobutyric (N) -0.4 -1.4 compare
carbon source carbon source 3-O-methyl-glucose 10 mM -0.4 -2.0 compare
phage P. putida Sci small MOI 0.1 -0.4 -1.3 compare
phage P. put PUT 10 MOI 0.1 -0.4 -2.3 compare
nitrogen source DL-2-Aminobutyric (N) -0.4 -2.5 compare
phage P. put South MOI 10 -0.4 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.3 -2.3 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.3 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.4 +1.6 compare
pH Growth at pH6 and (C) Trisodium citrate +0.4 +2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.4 +2.2 compare
micoeukaryotes C.elegans, mixed culture-1 +0.5 +3.0 compare