Fitness data for PP_1051 in Pseudomonas putida KT2440

Type II secretion pathway protein XcpV
SEED: General secretion pathway protein I
KEGG: general secretion pathway protein I

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)

group	condition	fitness	t score
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-1.5	-2.2	compare
carbon source	carbon source 2-Deoxy-D-glucose 10 mM	-1.4	-3.0	compare
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-1.3	-1.5	compare
temperature	Growth at 25C; with MOPS	-1.3	-2.0	compare
phage	P. putida PUT 7 MOI 1	-1.3	-1.0	compare
phage	P. putida Sci small MOI 0.1	-1.2	-1.1	compare
stress	Growth with Chloride 200 mM; with MOPS	-1.2	-1.9	compare
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	-1.1	-1.3	compare
carbon source	D-Glucose (C); with MOPS	-1.1	-2.4	compare
nitrogen source	2,6-diaminopimelic (N)	-1.1	-1.0	compare
nitrogen source	Urea (N)	-1.0	-1.2	compare
reactor	72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay	-1.0	-2.5	compare
carbon source	p-Coumaric (C)	-1.0	-2.8	compare
temperature shift	Temperature shift 30_to_21; with MOPS	-0.9	-1.7	compare
pH	Growth at pH9 and (C) D-Glucose	-0.9	-3.0	compare
carbon source	carbon source 2-Deoxy-D-glucose 50 mM	-0.9	-2.1	compare
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM	-0.9	-2.1	compare
nitrogen source	Ammonium chloride and TNT (N)	+0.9	+3.3	compare
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.2	+1.4	compare
nitrogen source	D-2-Aminobutyric (N)	+1.4	+2.9	compare