Fitness data for PP_1030 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: ABC-type sugar transport systems, ATPase components

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source acetate (C) -1.0 -2.8 compare
nitrogen source nitrate (N) -0.7 -2.3 compare
nitrogen source D-2-Aminobutyric (N) -0.7 -1.6 compare
carbon source DL-3-Hydroxybutyric (C) -0.7 -3.1 compare
temperature shift Temperature shift 30_to_25 -0.6 -2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.5 -2.0 compare
nitrogen source Urea (N) -0.5 -2.3 compare
pH Growth at pH6 and (C) Trisodium citrate -0.5 -2.3 compare
nitrogen source 2,6-diaminopimelic (N) -0.5 -1.1 compare
carbon source D-Glucose (C); with MOPS -0.5 -1.4 compare
nitrogen source nitrogen source nitrite 1mM -0.5 -1.2 compare
phage moi 100 Time6-phageFRS +0.4 +2.8 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +1.7 compare
temperature Growth at 25C +0.5 +1.5 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.5 +1.7 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.5 +2.3 compare
carbon source Tween 20 (C) +0.6 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +2.5 compare