Fitness data for PP_1027 in Pseudomonas putida KT2440

Exodeoxyribonuclease 7 large subunit
SEED: Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)
KEGG: exodeoxyribonuclease VII large subunit

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source 3-methyl-1-butanol (C) -1.9 -7.4 compare
carbon source 3-methyl-1-butanol (C) -1.1 -4.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.1 -3.2 compare
stress Growth with Chloride 200 mM -1.0 -2.6 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) -0.9 -3.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.7 -3.4 compare
carbon source Vanillin (C) -0.7 -3.0 compare
carbon source 1-Pentanol (C) -0.7 -3.3 compare
carbon source carbon source Glycerol 108.6 mM -0.7 -2.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.7 -1.6 compare
carbon source Vanillin (C) -0.6 -2.5 compare
carbon source L-Leucine (C) -0.6 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.6 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.6 -1.4 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) -0.6 -1.5 compare
carbon source L-Lysine (C) +0.6 +2.2 compare
phage PUT 8 MOI 1 +0.6 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.7 compare
carbon source Tween 20 (C) +0.7 +2.4 compare
carbon source 3-Hydroxydecanoic (C) +0.8 +1.7 compare