Fitness data for PP_1019 in Pseudomonas putida KT2440

carbohydrate-selective porin
SEED: Glucose-selective porin OprB
KEGG: porin

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -3.1 -9.8 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -2.9 -9.3 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.3 -5.3 compare
nitrogen source D-2-Aminobutyric (N) -1.1 -4.6 compare
nitrogen source D-2-Aminobutyric (N) -1.0 -4.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -4.8 compare
nitrogen source Propandiamine (N) -0.8 -3.6 compare
phage P. putida PUT 7 MOI 1 -0.8 -3.3 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.8 -4.3 compare
pH Growth at pH7 and (C) Trisodium citrate -0.7 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.7 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.7 +2.6 compare
carbon source D-Glucose (C) +0.7 +3.4 compare
no stress control Growth with no stress +0.8 +3.6 compare
carbon source D-Glucose (C) +0.8 +3.7 compare
no stress control Growth with no stress +0.8 +4.9 compare
temperature Growth at 25C +0.8 +4.2 compare
temperature Growth at 25C +0.9 +5.1 compare
carbon source D-Glucose (C) +0.9 +4.6 compare
pH pH 7 +1.3 +6.4 compare