Fitness data for PP_1006 in Pseudomonas putida KT2440

putative outer membrane heme receptor
SEED: Iron siderophore receptor protein
KEGG: iron complex outermembrane recepter protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
carbon source L-Leucine (C) -0.3 -2.2 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) -0.3 -2.2 compare
stress R2A with Fusaric 240 ug/mL -0.3 -1.8 compare
temperature shift Temperature shift 30_to_25; with MOPS -0.2 -1.7 compare
pH Growth at pH6 and (C) Trisodium citrate +0.2 +1.7 compare
temperature Growth at 30C; with MOPS +0.2 +1.7 compare
phage P. put PUT 10 MOI 0.1 +0.2 +1.9 compare
carbon source L-Lysine (C) +0.2 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.2 +1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.2 +1.7 compare
nitrogen source nitrate (N) +0.2 +1.6 compare
supernatant Supernatant; Paenibacillus sp. UNCCL52 spent media 0.5x and Ferric chloride 1 uM +0.2 +2.1 compare
pH Valerolactone (C) pH 6.5 +0.3 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +2.0 compare
carbon source 2-Methylbutanoic (C) +0.3 +2.4 compare
carbon source ferulate (C); with MOPS +0.3 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +2.7 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +1.8 +15.0 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +2.1 +15.9 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +2.4 +18.8 compare