Fitness data for PP_1000 in Pseudomonas putida KT2440

ornithine carbamoyltransferase, catabolic
SEED: Ornithine carbamoyltransferase (EC 2.1.3.3)
KEGG: ornithine carbamoyltransferase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.0)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -3.7 -7.5 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -2.9 -5.0 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -2.5 -5.1 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -2.5 -6.9 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -2.4 -7.5 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -2.3 -7.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -2.2 -3.6 compare
stress R2A with Fusaric 120 ug/mL -2.2 -5.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.1 -3.8 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -2.1 -6.7 compare
r2a control R2A control -2.1 -6.8 compare
nitrogen source nitrogen source nitrite 0.5mM -2.1 -3.8 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol -2.1 -3.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -2.1 -5.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -2.0 -2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.0 -5.1 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -2.0 -7.2 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -2.0 -6.1 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -2.0 -7.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -2.0 -4.9 compare