Fitness data for PP_0992 in Pseudomonas putida KT2440

conserved protein of unknown function, UPF0276 family
SEED: Uncharacterized protein conserved in bacteria, NMA0228-like
KEGG: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
phage P. putida Sci Big MOI 0.1 -1.3 -3.0 compare
phage P. putida Sci small MOI 0.1 -1.1 -2.2 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay -0.7 -2.8 compare
mixed community Putida_ML5X with Paraburkholderia sabiae T6SS mutant -0.6 -2.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.6 -1.8 compare
carbon source D-Glucose (C) 1.25 mM -0.6 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.5 -1.5 compare
nitrogen source nitrogen source nitrite 1mM -0.5 -1.3 compare
phage P. putida Missley MOI 0.1 -0.5 -1.7 compare
stress R2A with Fusaric 240 ug/mL -0.5 -1.5 compare
pH Growth at pH6 and (C) Trisodium citrate +0.5 +1.4 compare
nitrogen source 2,6-diaminopimelic (N) +0.5 +1.9 compare
carbon source carbon source 4-vinylphenol 0.1 mM +0.5 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +2.5 compare
pH Growth at pH9 and (C) Trisodium citrate +0.7 +2.2 compare
carbon source carbon source 3-O-methyl-glucose 10 mM +0.7 +2.0 compare
carbon source ferulate (C); with MOPS +0.7 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +2.7 compare