Fitness data for PP_0972 in Pseudomonas putida KT2440

UPF0213 protein PP_0972
SEED: FIG00955494: hypothetical protein
KEGG: putative endonuclease

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -2.6 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.8 -2.0 compare
nitrogen source 2,6-diaminopimelic (N) -1.3 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.3 -1.9 compare
stress Growth with Chloride 500 mM; with MOPS -1.2 -2.9 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -1.2 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.1 -2.4 compare
nitrogen source Urea (N); with MOPS -1.0 -1.1 compare
carbon source Myristic (C) -1.0 -1.5 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.0 -1.4 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol -1.0 -3.4 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -2.3 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol -0.9 -1.9 compare
carbon source Tween 20 (C) -0.9 -1.2 compare
stress Growth with Chloride 500 mM; with MOPS +0.9 +1.8 compare
carbon source L-Leucine (C) +0.9 +2.5 compare
dilutelb LB 0.1x with 55.5 mM D-Glucose +0.9 +3.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.9 +2.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.9 +2.9 compare
nitrogen source D-2-Aminobutyric (N) +1.2 +2.5 compare