Fitness data for PP_0969 in Pseudomonas putida KT2440

Transcriptional regulator, GntR family
SEED: Transcriptional regulator, GntR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage P. putida Missley MOI 0.1 -0.9 -2.1 compare
pH Growth at pH7 and (C) D-Glucose -0.7 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.7 -1.4 compare
phage P. putida Sci small MOI 0.1 -0.6 -1.6 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.5 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.5 -1.9 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml -0.5 -1.9 compare
phage P. put South MOI 0.1 +0.4 +2.4 compare
nitrogen source nitrate (N) +0.4 +2.1 compare
carbon source carbon source 4-vinylphenol 0.1 mM +0.4 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +1.5 compare
stress Growth with Chloride 500 mM +0.5 +2.3 compare
carbon source carbon source 3-O-methyl-glucose 50 mM +0.5 +1.9 compare
temperature shift Temperature shift 30_to_25; with MOPS +0.5 +2.0 compare
phage P. putida Sci Big MOI 0.1 +0.5 +1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.8 compare
temperature shift Temperature shift 10_to_25; with MOPS +0.6 +2.3 compare
temperature shift Temperature shift 30_to_25 +0.6 +3.6 compare
stress Growth with Chloride 500 mM; with MOPS +0.6 +3.0 compare
pH pH 5 +0.6 +2.2 compare