Fitness data for PP_0929 in Pseudomonas putida KT2440

putative Lipoprotein
SEED: Rare lipoprotein A
KEGG: rare lipoprotein A

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.8 -2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.7 -2.3 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.7 -2.7 compare
pH Growth at pH7 and (C) D-Glucose -0.7 -1.4 compare
temperature shift Temperature shift 10_to_30 -0.6 -2.7 compare
nitrogen source NAG (N); with MOPS -0.6 -1.5 compare
stress TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 500 uM; timepoint 2 -0.6 -3.3 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.6 -1.5 compare
carbon source butyrate (C) -0.6 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.3 compare
carbon source carbon source 2-Deoxy-D-glucose 10 mM +0.6 +1.5 compare
phage P. putida Sci small MOI 0.1 +0.6 +2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.7 +1.5 compare
carbon source L-Leucine (C) +0.7 +2.0 compare
pH Growth at pH7 and (C) Trisodium citrate +0.7 +2.5 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.7 +1.2 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.8 +3.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +2.4 compare